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1. Guigò R Finding genes by comparing genomes: the case of selenoproteins Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Comparative genomics |
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2. Harris MA Ontologies for Biology: The Gene Ontology Project Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Database annotation and data mining |
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3. Kleywegt GJ Structural Bioinformatics - Understanding Protein Structure and Function Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Structural bioinformatics |
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4. Corà D, Herrmann C, Dieterich C, Di Cunto F, Provero P, Caselle M Identification of human transcription factor binding sites by comparative genomics. Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Comparative genomics |
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5. Ambesi-Impiombato A, Di Bernardo D Novel Computational Method for Human Cis Regulatory Elements Prediction Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Comparative genomics |
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6. Sironi M, Riva L, Menozzi G, Pozzoli U Silencer elements as possible inhibitors of pseudoexon splicing Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Comparative genomics |
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7. Pavesi G, Mauri G, Pesole G Weeder Web: a Web-Based Tool for the Discovery of Transcription Factor Binding Sites Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Comparative genomics |
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8. Cruz P, Maselli V, Sanges R, Stupka E CODE: Comparative Genomics of Disease Genes. Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Database annotation and data mining |
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9. Masseroli M, Martucci D, Pinciroli F Genome dynamic and statistical functional annotations for biological knowledge mining from microarray data Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Database annotation and data mining |
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10. Guffanti A, Luzi L, Confalonieri S, Trubia M, Volorio S, Graziani S, Pelicci PG, Di Fiore PP A bioinformatic strategy for large-scale identification and annotation of chromosomal aberrations in tumors Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Database annotation and data mining |
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11. Tasco GL, Montanucci L, Fariselli P, Martelli PL, Marani P, Casadio R Protein structures and thermostability Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Structural genomics |
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12. Passerini A, Frasconi P Learning to discriminate between ligand bound and disulfide bound cysteines Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Structural genomics |
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13. Lexa M, Valle G Combining rapid word searches with segment-to-segment alignment for sensitive similarity detection, domain identification and structural modelling. Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Structural genomics |
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14. Ferrè F, Ausiello G, Zanzoni A, Helmer-Citterich M Large scale surface comparison for the identification of functional similarities in unrelated proteins Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Structural genomics |
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15. Greco C, Sacco E, Vanoni M, De Gioia L Structural determinants of the regulatory action exerted by the aminoterminal region of hSos1 on the Ras-GEF activity Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Structural genomics |
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16. Passamano M, D'Agostino N, Caprera A, Milanesi L Comprehensive Analysis of Protein Kinase Domains Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Structural genomics |
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17. Costantini S, Colonna G, Facchiano AM Comparative modelling for predicting the different conformations assumed by a protein during its different activities Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Structural genomics |
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18. Leo P, Marinelli C, Pappadà G, Scioscia G, Zanchetta L BioWBI: an Integrated Tool for building and executing Bioinformatic Analysis Workflows Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Computer algorithms and applications |
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19. Merelli E, Romano P, Scortichini L A Workflow Service for Biomedical Application Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Computer algorithms and applications |
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20. Mishra B, Policriti A Systems Biology, Automata, and Languages Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Computer algorithms and applications |
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21. Bultrini E, Pizzi E Linguistic analysis of promoter regions in eukaryotic genomes Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Computer algorithms and applications |
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22. Pardo M, Sberveglieri G, Wold B Yet another Feature Selection Study for Microarrays Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Microarray algorithms and data analysis |
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23. Fu L-M, Medico E FMC, a Fuzzy Map Clustering algorithm for microarray data analysis Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Microarray algorithms and data analysis |
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24. Masulli F, Rovetta S Ensembling and Clustering Approach to Gene Selection Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Microarray algorithms and data analysis |
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25. Cordero F, Lazzarato F, De Bortoli M, Weisz A, Cicatiello L, Scafoglio C, Basile W, Calogero RA Putative Estrongen-Responsive Genes database (PERG) Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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26. Muselli M, Ruffino F, Valentini G An Artificial Model for Validating Gene Selection Methods Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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27. Di Camillo B, Toffolo G, Cobelli C, Nair KS Selection of Insulin Regulated Gene Expression Profiles Based on Intensity-Dependent Noise Distribution of Microarray Data Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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28. Barberis M, De Gioia L, Ruzzene M, Sarno S, Coccetti P, Pinna LA, Vanoni M, Alberghina L The Cyclin-Dependent Kinase Inhibitor Sic1 of Saccharomyces cerevisiae Is a Functional and Structural Homologous to the Mammalian p27Kip1 Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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29. Marabotti A, D'Auria S, Rossi M, Facchiano AM Modelling the Three-Dimensional Structure of a Sugar Binding Protein from a Thermophilic Organism: Analysis on Stability and Sugar Binding Simulations. Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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30. Sboner A, Barbareschi M, Dell'Anna R, Demichelis F Large scale TMA experiments: automation and data management Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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31. Eleuteri A, Tagliaferri R, Acernese F, Milano L, De Laurentiis M Information Geometry for Survival Analysis and Feature Selection Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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32. Cozzini P, Fornabaio M, Mozzarelli A, Spyrakis F, Kellogg GE, Abraham DJ HIV-1 protease: a good system to evaluate protein-ligand interactions, water role and protonation state, using an empirical approach Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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33. Marra D, Malusa F, Piersigilli F, Manniello MA, Romano P The CABRI website: integrating biological resources information in the bioinformatics network environment Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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34. Toppo S, Fontana P, Velasco R, Valle G, Tosatto SCE FOX (FOld eXtractor): A novel protein fold recognition method using iterative PSI-BLAST searches and structural alignments Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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35. Trovato A, Seno F A new perspective on Analysis of Helix-Helix Packing Preferences in Globular Proteins Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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36. Papaleo E, Vai M, Popolo L, Fantucci P, De Gioia L Structural models of the catalytic domain of the yeast β-(1,3)-glucan transferase Gas1 by combined threading and secondary structure prediction methods Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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37. Pasa S, Kohn KW, Aladjem MI, Consiglieri C, Cocozza S, Bordo D, Parodi S In silico model of Molecular Interaction Maps: c-Myc and cell cycle control Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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38. Santarossa G, Roggia L, De Gioia L, Fantucci P A Molecular Dynamics Study of the DoubleDominant Negative Mutation W809E/T935E in Ras-GEF Complex Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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39. Roasio R, Fu L-M, Botta M, Medico E MulCom: a novel program for the statistical analysis of genomic data obtained on multiple microarray platforms Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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40. Fogolari F, Tosatto SCE Loop predictions using molecular mechanics/Poisson- Boltzmann solvent accessible surface area (MM/PBSA) Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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41. Staiano A, Tagliaferri R, De Vinco L, Longo G Advanced Data Mining Methodology Based on Latent Variable Models Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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42. Antoniol G, Ceccarelli M A Computational Intelligence Approach to Unsupervised Microarray Image Gridding Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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43. Rossi V, Picco R, Vacca M, D'Urso M, D'Esposito M, Galli T, Filippini F Novel sequence patterns specific to VAMP subfamilies Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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44. Gaiji N, Mazzitello R, Beringhelli T, Fantucci P Bovine β-lactoglobulin: Interaction studies with Norfloxacin Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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45. Manzoni R, Sacco E, De Gioia L, Vanoni M Hydrophobic network between AB and HI hairpins suggests a new role for AB hairpin in GEF action mechanism Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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46. Mapelli V, Accardo E, Fantinato S, Sacco E, De Gioia L, Vanoni M Structure-based hypothesis on active role of RasGEF αG-helix Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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47. D'Ursi P, Rovida E, Merati G, Biguzzi E, Caprera A, Milanesi L, Faioni E Computational analysis of naturally occurring protein C mutants: electrostatic properties implications. Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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48. Mutarelli M, Basile W, Cicatiello L, Scafoglio C, Colonna G, Weisz A, Facchiano AM Comparative analysis with three different microarray platforms of the oestrogenresponsive transcriptome from breast cancer cells Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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49. Catalano D, Licciulli F, Grillo G, Liuni S, Pesole G, Saccone C, D'Elia D MitoNuc: a database of nuclear genes encoding for mitochondrial proteins Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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50. Lazzari B, Milanesi L, Stella A, Caprera A, Bianchi F, Vecchietti A, Pozzi C ESTree DB: a Tool for Peach Functional Genomics Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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51. Bonizzoni P, Dondi R, Rizzi R, Pesole G ASPIC: a Novel Method to Predict Alternative Splicing Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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52. Marangoni R Simulating genes families Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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53. Carrara GE, Stella A, Pinciroli F, Alcalay M, Masseroli M Automatic extraction of gene annotations from data-rich HTML pages Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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54. Cappadona S, Diestellhorst L, Kemp G, Cerutti S Analysis of β-helix proteins using the STACK toolkit Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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55. Ferraro E, Ausiello G, Panni S, Cesareni G, Helmer-Citterich M Definition of a neural strategy for the prediction of protein interaction specificity Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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56. Bansal M, Di Bernardo D Inferring gene regulatory networks from time expression profiles Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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57. Malerba G, Trabetti E, Sandri M, Xumerle L, Cavallari U, Galavotti R, Biscuola M, Patuzzo C, Pignatti PF Single and multilocus analyses for the identification of at risk genotypes in cardiovascular disease Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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58. Di Bernardo D, Gardner TS, Collins JJ Drug Target Identification from Inferred Gene Networks: a computational and experimental approach Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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59. Amici R, Bartocci E, Merelli E A virtual laboratory for simulating metabolic pathways Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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60. Puntervoll P, Linding R, Gemund C, Chabanis-Davidson S, Mattingsdal M, Cameron S, Martin DMA, Ausiello G, Brannetti B, Costantini A, Zanzoni A, Maselli V, Via A, Cesareni G, Diella F, Superti-Furga G, Wyrwicz L, Ramu C, McGuigan C, Gudavalli R, Letunic I, Bork P, Rychlewski L, Kuster B, Helmer-Citterich M, Hunter WN, Aasland R, Gibson TJ Eukaryotic Linear Motifs in the ELM Web Tool Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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61. Ceroni A, Frasconi P Using Constraints on Beta Partners to Reconstruct Mainly Beta Proteins Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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62. Di Dato V, Di Lauro R, Chiusano ML Comparative genomics to identify regulatory regions: an example from the PAX8 gene Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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63. Capriotti E, Fariselli P, Rossi I, Casadio R Improving the Detection of Protein Remote Homologues Using Shannon Entropy Information Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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64. D'Alessandro L, Felice B, Montemurro F, Medico E Meta-analysis of multiple microarray datasets reveals a novel genomic signature associated to invasive growth of epithelial cells and early breast cancer metastasis. Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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65. Menozzi G, Riva L, Sironi M, Pozzoli U Intron and exon lengths influence on splicing Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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66. Riva L, Menozzi G, Sironi M, Cerutti S, Pozzoli U A Wavelet Based Method to Predict Nucleosome Positions Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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67. Galfrè S, Morandin F, Cozza A, Pellegrini S, Marangoni R A method to improve microarray-based identification of SNPs Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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68. Pozzoli U, Menozzi G, Riva L, Sironi M COBITIS: COmputational BIology Tools Interoperability Schema Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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69. Ceol A, Montecchi-Palazzi L, Persico M, Gavrila C, Castagnoli L, Cesareni G The (new) MINT Database. Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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70. Cannata N, Forcato C, Fabbro G, Pasin A, Balen J, Valle G Searching for discriminating degenerated patterns between two populations of sequences Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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71. Vitulo N, Cestaro A, Vezzi A, Campanaro S, Simonato F, Lauro F, Malacrida G, Simionati B, Cannata N, Bartlett D, Valle G Development of tools based on UCSC and KEGG for the annotation of the Photobacterium profundum genome Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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72. Attimonelli M, Accetturo M, Scioscia G, Marinelli C, Leo P, Santamaria M, Mona S, Lascaro D, Cascione I, Tommaseo-Ponzetta M HMDB, the Human Mitochondrial Data Base, a genomic resource supporting population genetics studies and biomedical research on mitochondrial diseases Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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73. Attimonelli M, Accetturo M, Lascaro D Statistical prediction of pathogenic variant sites in human mitochondrial genomes Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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74. Di Vincenzo L, Grgurina I, Pascarella S Computational analysis of structural properties of classical and novel non ribosomal aminoacyladenylate forming domains. Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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75. Ceroni A, Frasconi P On the Role of Long-Range Dependencies in Learning Protein Secondary Structure Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |
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76. Accardo MC, Giordano E, Riccardo S, Digilio FA, Iazzetti G, Calogero RA, Furia M RNomics: a computational search for box C/D snoRNA genes in the D.melanogaster genome Meeting: BITS 2004 - Year: 2004 Abstract | Full text in a new tab Topic: Unspecified |